{
  "_id": "6a2123adcd65a98ecbd1ff5a",
  "Package": "GCSanndataR",
  "Type": "Package",
  "Title": "Google Cloud Storage-Backed AnnData for R",
  "Version": "0.1.1",
  "Author": "Masahiro Kanai",
  "Maintainer": "Masahiro Kanai <mkanai@broadinstitute.org>",
  "Description": "Extends the 'anndataR' package to provide Google Cloud\nStorage-backed AnnData functionality for R. This package allows\nusers to work with AnnData objects stored in Google Cloud\nStorage without downloading the entire file, enabling efficient\naccess to large single-cell datasets directly from the cloud.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "Remotes": [
    "scverse/anndataR"
  ],
  "RoxygenNote": "7.3.2",
  "Config/pak/sysreqs": "libpng-dev python3",
  "Repository": "https://mkanai.r-universe.dev",
  "Date/Publication": "2026-04-02 17:26:30 UTC",
  "RemoteUrl": "https://github.com/mkanai/GCSanndataR",
  "RemoteRef": "HEAD",
  "RemoteSha": "803b104884078d54542df22a6654f9515b4e6665",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-04 07:02:29 UTC",
    "User": "root"
  },
  "MD5sum": "5835929ebc7b53a7792158fc233bf995",
  "_user": "mkanai",
  "_type": "src",
  "_file": "GCSanndataR_0.1.1.tar.gz",
  "_fileid": "257f4449d744f0683cd68bafec42c14c1b1a31b4979b92e0a7cd0d518e7ccb5e",
  "_filesize": 83897,
  "_sha256": "257f4449d744f0683cd68bafec42c14c1b1a31b4979b92e0a7cd0d518e7ccb5e",
  "_created": "2026-06-04T07:02:29.000Z",
  "_published": "2026-06-04T07:05:17.052Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79466956309,
      "time": 131,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7405102280"
    },
    {
      "job": 79466956377,
      "time": 114,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7405097158"
    },
    {
      "job": 79466956455,
      "time": 99,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7405092206"
    },
    {
      "job": 79466956459,
      "time": 98,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7405092090"
    },
    {
      "job": 79466475531,
      "time": 200,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7405063992"
    },
    {
      "job": 79466956501,
      "time": 120,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7405099115"
    },
    {
      "job": 79466956339,
      "time": 79,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7405086621"
    },
    {
      "job": 79466956343,
      "time": 111,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7405095709"
    },
    {
      "job": 79466956329,
      "time": 79,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7405086447"
    }
  ],
  "_buildurl": "https://github.com/r-universe/mkanai/actions/runs/26936185563",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/mkanai/GCSanndataR",
  "_commit": {
    "id": "803b104884078d54542df22a6654f9515b4e6665",
    "author": "Masahiro Kanai <mkanai@broadinstitute.org>",
    "committer": "Masahiro Kanai <mkanai@broadinstitute.org>",
    "message": "Default to HDF5AnnData for local paths to match GCS backed behavior\n\nChange default `as` from \"InMemoryAnnData\" to \"HDF5AnnData\" for local\nh5ad files. This avoids CSC sparse matrix conversion issues in\nas_InMemoryAnnData and provides consistent backed/lazy behavior\nmatching the GCS path (GCSAnnData).\n\nCo-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>\n",
    "time": 1775150790
  },
  "_maintainer": {
    "name": "Masahiro Kanai",
    "email": "mkanai@broadinstitute.org",
    "login": "mkanai",
    "linkedin": "in/masakanai",
    "orcid": "0000-0001-5165-4408",
    "twitter": "@masakanai",
    "description": "Instructor in Medicine at Massachusetts General Hospital & Broad Institute of MIT and Harvard",
    "uuid": 121819
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "anndataR",
      "version": ">= 0.1.0",
      "role": "Imports"
    },
    {
      "package": "cli",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "reticulate",
      "version": ">= 1.36.1",
      "role": "Imports"
    },
    {
      "package": "R6",
      "role": "Imports"
    },
    {
      "package": "SingleCellExperiment",
      "role": "Suggests"
    },
    {
      "package": "SeuratObject",
      "role": "Suggests"
    }
  ],
  "_owner": "mkanai",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-10",
      "n": 2
    },
    {
      "week": "2026-14",
      "n": 2
    }
  ],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "mkanai",
      "count": 12,
      "uuid": 121819
    }
  ],
  "_userbio": {
    "uuid": 121819,
    "type": "user",
    "name": "Masahiro Kanai",
    "description": "Instructor in Medicine at Massachusetts General Hospital & Broad Institute of MIT and Harvard"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/GCSanndataR"
  },
  "_devurl": "https://github.com/mkanai/gcsanndatar",
  "_searchresults": 1,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/GCSanndataR.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "install_gcs_anndata",
    "read_h5ad"
  ],
  "_help": [
    {
      "page": "install_gcs_anndata",
      "title": "Install the gcs_anndata Python package",
      "topics": [
        "install_gcs_anndata"
      ]
    },
    {
      "page": "read_h5ad",
      "title": "Read H5AD",
      "topics": [
        "read_h5ad"
      ]
    }
  ],
  "_readme": "https://github.com/mkanai/GCSanndataR/raw/HEAD/README.md",
  "_rundeps": [
    "anndataR",
    "cli",
    "glue",
    "here",
    "jsonlite",
    "lattice",
    "lifecycle",
    "magrittr",
    "Matrix",
    "png",
    "purrr",
    "R6",
    "rappdirs",
    "Rcpp",
    "RcppTOML",
    "reticulate",
    "rlang",
    "rprojroot",
    "vctrs",
    "withr"
  ],
  "_score": 2,
  "_indexed": true,
  "_nocasepkg": "gcsanndatar",
  "_universes": [
    "mkanai"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-06-04T07:04:48.000Z",
      "distro": "noble",
      "commit": "803b104884078d54542df22a6654f9515b4e6665",
      "fileid": "25009e512863de33e965e00304c9340cb58fd1c2fac57436541bcc40ae528fe0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mkanai/actions/runs/26936185563"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-06-04T07:04:30.000Z",
      "distro": "noble",
      "commit": "803b104884078d54542df22a6654f9515b4e6665",
      "fileid": "50e9870f142cc9799436e7b737dc6fd3491dfd278b87f4cdefb7f2c116564f52",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mkanai/actions/runs/26936185563"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-06-04T07:04:12.000Z",
      "commit": "803b104884078d54542df22a6654f9515b4e6665",
      "fileid": "027c687faee4bb7e946f8009469e6b093ae2a94155765a891184eacaf335884f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mkanai/actions/runs/26936185563"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-06-04T07:04:13.000Z",
      "commit": "803b104884078d54542df22a6654f9515b4e6665",
      "fileid": "87757ee297281d197e40bc82991bd93e3efced77d2eb64a051b80e066baa4a9a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mkanai/actions/runs/26936185563"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.1",
      "date": "2026-06-04T07:04:48.000Z",
      "commit": "803b104884078d54542df22a6654f9515b4e6665",
      "fileid": "a309494b50d1a5c41119b2e5afa7c918860a4e5aa9ace66c520cb369ef368da4",
      "status": "success",
      "buildurl": "https://github.com/r-universe/mkanai/actions/runs/26936185563"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-06-04T07:03:44.000Z",
      "commit": "803b104884078d54542df22a6654f9515b4e6665",
      "fileid": "2bc3804ea5a165cfc86311a32985d5411f454a88a266004247bbaa722dab6bac",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mkanai/actions/runs/26936185563"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-06-04T07:04:18.000Z",
      "commit": "803b104884078d54542df22a6654f9515b4e6665",
      "fileid": "e01e738dc218ae78c357833ce959df9151a9cd540b00fd84092058bafef3199b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mkanai/actions/runs/26936185563"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-06-04T07:03:46.000Z",
      "commit": "803b104884078d54542df22a6654f9515b4e6665",
      "fileid": "45ca57ce12c0bf6822d9128793a0a0e36a5f9cdb0427fe97f4f81c66b92a3fe1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mkanai/actions/runs/26936185563"
    }
  ]
}